Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGGACGAAACCGTGGTCAGCTGCAAG
((((((((((((((((..(((&)))..)))..))))....))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_182946
GeneSymbolNIN
Binding site2148,2176
Score0.923
Seed1
Au0.5
Energy-22.1
Binding len28
Me-3.938
Phylopstem0.5129662272727272
Phylopflank1.5954351112499996
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure