Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGTTCGACTGGAGTATGCT
..((((((.(((((((((((.&)))))..)))))).))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_182948
GeneSymbolPRKACB
Binding site540,562
Score0.923
Seed1
Au0.662
Energy-18.4
Binding len22
Me-6.013
Phylopstem1.9754117692307693
Phylopflank2.51464364
Longest consecutive pairings6
Position of longest consecutive pairings9
Pairings in 3prime end7
PositionCDS
2D Structure