Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCAGCAGTGCCAGGC
.((((((((....(((((....&)))))...)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_182961
GeneSymbolSYNE1
Binding site12697,12714
Score0.846
Seed1
Au0.382
Energy-20.4
Binding len17
Me-12.497
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure