Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCCTGCATGGGTGCTAGGC
.((((((((...((((((....&.))))))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_182962
GeneSymbolBIRC3
Binding site4021,4041
Score0.923
Seed1
Au0.559
Energy-20.3
Binding len18
Me-11.207
Phylopstem-0.34980867499999996
Phylopflank0.28130595
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure