Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCATTCTGATGCTGGGA
.((((((((..((((((((...&))))))))...)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_182962
GeneSymbolBIRC3
Binding site3927,3947
Score0.846
Seed1
Au0.588
Energy-19.5
Binding len20
Me-7.861
Phylopstem0.748453875
Phylopflank0.26583751
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end5
Position3UTR
2D Structure