Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCGGTAGATGCACACCTTGTGCCACTGGAGGAGCCAGTGC
(((((((((((((((((((...&))))))......................))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_182965
GeneSymbolSPHK1
Binding site1449,1491
Score0.846
Seed1
Au0.368
Energy-29.7
Binding len42
Me-3.938
Phylopstem1.5389563048780486
Phylopflank4.070879035000001
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure