Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCCTTCCTTCCCTTGTCCCCGTAGGGTTATAGCTGGAGCTGCC
..((((((.(((((((((...&.))))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_182970
GeneSymbolRIMS4
Binding site2596,2642
Score1.0
Seed1
Au0.529
Energy-22.7
Binding len18
Me-6.013
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end5
Position3UTR
2D Structure