Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGACCAGGCACTGTGTGCCAGC
..((((((((((.(((......&.))).)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_182973
GeneSymbolTMPRSS9
Binding site1308,1330
Score0.846
Seed1
Au0.412
Energy-19.6
Binding len16
Me-6.246
Phylopstem0.71073136
Phylopflank0.6014148175
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure