Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACCCAAGGACGGGTGTGGGGGGGCTGTGG
(((.(((((((((((((((((.&))))))).))).........)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_182973
GeneSymbolTMPRSS9
Binding site3512,3543
Score0.846
Seed0
Au0.382
Energy-24.3
Binding len31
Me-6.97
Phylopstem3.2215877259259256
Phylopflank3.638649547500001
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure