Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCACACGGCCGAGCTGCGGG
((((((((.(((((((..(((&)))..))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_182973
GeneSymbolTMPRSS9
Binding site422,443
Score1.0
Seed1
Au0.309
Energy-25.1
Binding len21
Me-4.994
Phylopstem1.343823125
Phylopflank1.2455034749999998
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure