Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCCGCATGCTGTG
..((((((((((((((.....&))))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_182973
GeneSymbolTMPRSS9
Binding site3215,3231
Score0.846
Seed1
Au0.338
Energy-23.7
Binding len16
Me-4.957
Phylopstem3.6929244666666667
Phylopflank3.563916700000001
Longest consecutive pairings9
Position of longest consecutive pairings7
Pairings in 3prime end3
PositionCDS
2D Structure