Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTGCAGCTGTGGCA
.....((((((((((((((((&)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001350506
GeneSymbolRARS2
Binding site1839,1856
Score1.0
Seed0
Au0.632
Energy-22.7
Binding len17
Me-13.666
Phylopstem2.056946875
Phylopflank2.7547278552499996
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure