Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGAAGCCAGGCGTCTACACCAAAGTCAGTGA
(((((((((((((((((((...&))))))))...)))............)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_182983
GeneSymbolHPN
Binding site1974,2009
Score1.0
Seed1
Au0.426
Energy-24.0
Binding len35
Me-3.938
Phylopstem2.999128870588235
Phylopflank4.8175493550000015
Longest consecutive pairings8
Position of longest consecutive pairings27
Pairings in 3prime end5
PositionCDS
2D Structure