Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGAAGGCGGCCGCACCTGGGAGGGGAGCTTGGTGGCCCCCGTGGCTGCAAG
((((((((((((((((..(((&)))....))))))))).............................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_183002
GeneSymbolSLC8A3
Binding site3276,3329
Score0.885
Seed1
Au0.353
Energy-24.7
Binding len53
Me-3.938
Phylopstem2.0487848644444444
Phylopflank1.4925650724999997
Longest consecutive pairings9
Position of longest consecutive pairings37
Pairings in 3prime end6
PositionCDS
2D Structure