Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCGCACTTCGGCTGCAC
.((((((((.((.(((.((((&)))).))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_183002
GeneSymbolSLC8A3
Binding site2960,2980
Score0.923
Seed1
Au0.426
Energy-22.1
Binding len20
Me-6.325
Phylopstem0.28755987500000013
Phylopflank1.8096380562499998
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure