Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCCAGGAAGGGCA
.....((.((((((((((....&)))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_183009
GeneSymbolVIRMA
Binding site707,720
Score1.0
Seed0
Au0.544
Energy-20.7
Binding len13
Me-15.979
Phylopstem1.9422186
Phylopflank2.02857374125
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure