Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCCAGGAGTAAGAGCCC
....(((((.((((((((....&))))))))...))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_183009
GeneSymbolVIRMA
Binding site153,170
Score0.923
Seed0
Au0.515
Energy-19.7
Binding len17
Me-10.789
Phylopstem-0.2866603750000001
Phylopflank0.24401193540000013
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end4
PositionCDS
2D Structure