Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTACAATCGAGACTGCAAT
((((((((.(((((((((...&))))))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_183011
GeneSymbolCREM
Binding site2775,2794
Score1.0
Seed1
Au0.647
Energy-19.9
Binding len19
Me-4.994
Phylopstem3.1536966555555557
Phylopflank3.2751425775000005
Longest consecutive pairings11
Position of longest consecutive pairings8
Pairings in 3prime end5
Position3UTR
2D Structure