Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTGCAGCTGTGGCA
.....((((((((((((((((&)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001350510
GeneSymbolRARS2
Binding site1839,1856
Score1.0
Seed0
Au0.632
Energy-22.7
Binding len17
Me-13.666
Phylopstem1.54249576875
Phylopflank3.6841001625000005
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure