Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGCAGGCAGTTGCGAA
((((((((((..((((.....&.)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_183044
GeneSymbolRNF6
Binding site2131,2147
Score0.846
Seed1
Au0.544
Energy-17.6
Binding len16
Me-10.109
Phylopstem-0.16565313999999998
Phylopflank-0.004860554500000003
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure