Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCAGCTGCCTGTCTGGTGTCTGTCTTTGGTGTCAGAACTTTGGGGGCCGGG
..(((((((((((((((((((.&.))))).......................)))))....))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_183057
GeneSymbolVPS28
Binding site978,1032
Score0.846
Seed1
Au0.426
Energy-24.0
Binding len48
Me-4.957
Phylopstem3.6955255326086953
Phylopflank4.585608645000001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure