Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCAGCCCCATTGAGCGGTTGCAGC
(((((((((((((((..((((&))))))))).......)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_183059
GeneSymbolRD3
Binding site623,650
Score0.923
Seed1
Au0.441
Energy-21.8
Binding len27
Me-4.171
Phylopstem0.19193081818181812
Phylopflank0.22842724375000012
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure