Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGTGAGTTCAGATCCCATGCTAACCGCAGCTGCT
..(((((((((((((((.((.&.)).))).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_183061
GeneSymbolSLC9C1
Binding site645,682
Score1.0
Seed1
Au0.515
Energy-29.4
Binding len21
Me-4.957
Phylopstem4.0792362481249995
Phylopflank4.757437899999999
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure