Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGACAGCCGCGGCGCCGCGAG
((((.(((((((((((..(((&))).)))))))))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_183079
GeneSymbolPRNP
Binding site7,30
Score0.846
Seed0
Au0.305
Energy-24.9
Binding len23
Me-8.057
Phylopstem-1.4186953454545455
Phylopflank1.7217527005
Longest consecutive pairings11
Position of longest consecutive pairings8
Pairings in 3prime end6
Position5UTR
2D Structure