Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTGCCCAGGCTGGAGTGCAGTGG
((((((((((..(((((((((.&)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_183231
GeneSymbolIKZF3
Binding site4353,4376
Score0.923
Seed1
Au0.338
Energy-28.9
Binding len23
Me-10.109
Phylopstem1.006019818181818
Phylopflank-0.020501027499999908
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure