Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCCAAAGTGTTGGGGTTACAGGCGTGAGGCACCGCGGCTGG
...(((((((((.(((.....&.)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_183231
GeneSymbolIKZF3
Binding site8040,8085
Score1.0
Seed0
Au0.485
Energy-21.1
Binding len14
Me-7.804
Phylopstem-0.264699
Phylopflank1.074746025
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure