Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTGCCCAGGCTGGAGTGCAGTGG
((((((((((..(((((((((.&)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_183232
GeneSymbolIKZF3
Binding site4404,4427
Score1.0
Seed1
Au0.338
Energy-28.9
Binding len23
Me-10.109
Phylopstem0.17005096363636366
Phylopflank-0.05205486000000001
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure