Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGA
....(((((((((((((((((&)))))).......................))))))...))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_183234
GeneSymbolRAB27A
Binding site2839,2883
Score0.846
Seed0
Au0.382
Energy-24.7
Binding len44
Me-9.547
Phylopstem5.438322046511628
Phylopflank5.006711214625
Longest consecutive pairings6
Position of longest consecutive pairings38
Pairings in 3prime end8
Position3UTR
2D Structure