Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGA
....(((((((((((((((((&)))))).......................))))))...))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_183236
GeneSymbolRAB27A
Binding site2812,2856
Score0.846
Seed0
Au0.382
Energy-24.7
Binding len44
Me-9.547
Phylopstem5.033668674418605
Phylopflank4.41146445425
Longest consecutive pairings6
Position of longest consecutive pairings38
Pairings in 3prime end8
Position3UTR
2D Structure