Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCAGGCTGCAGCTT
....((((((((((...(((.&)))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_183236
GeneSymbolRAB27A
Binding site1778,1794
Score0.846
Seed0
Au0.647
Energy-18.7
Binding len16
Me-10.515
Phylopstem-0.18081603000000002
Phylopflank0.13439508499999997
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure