Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTAGAATCTTAACTTTTCACATCTGCAGATGCAGT
(((((.((((((.((((((((&.)))))..))).)))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_183237
GeneSymbolRNF7
Binding site1770,1808
Score0.846
Seed0
Au0.632
Energy-19.4
Binding len25
Me-7.128
Phylopstem-0.37567361
Phylopflank0.02550414749999999
Longest consecutive pairings6
Position of longest consecutive pairings7
Pairings in 3prime end8
Position3UTR
2D Structure