Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGACTGGCAGCTGCAGA
((((((((((((((((.....&))))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_183241
GeneSymbolPAXX
Binding site432,450
Score0.846
Seed1
Au0.338
Energy-24.8
Binding len18
Me-3.938
Phylopstem1.6372719411764702
Phylopflank2.2713254549999995
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure