Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTCTTACGAAAAGCGGCTGTAC
.(((((((((..(((((((((&)).)))))))...))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_183243
GeneSymbolIMPDH1
Binding site1747,1770
Score0.846
Seed1
Au0.382
Energy-22.3
Binding len23
Me-9.965
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure