Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCCGGAGCTGCGC
.(((((((.(((....(((((&)))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_183337
GeneSymbolRGS11
Binding site1980,1997
Score0.923
Seed1
Au0.353
Energy-21.9
Binding len17
Me-7.964
Phylopstem2.471770285714286
Phylopflank2.0956644449999997
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end5
Position3UTR
2D Structure