Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCGAGGCCGCGGCC
.....(((((((((...((((&))))...))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_183337
GeneSymbolRGS11
Binding site2061,2078
Score0.846
Seed0
Au0.353
Energy-20.6
Binding len17
Me-14.634
Phylopstem4.648288888888889
Phylopflank3.1061545875
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure