Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGCACCATCGCCAGCTGCT
..((((((((((((((..(((&))).)))..))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_183352
GeneSymbolSEC13
Binding site741,763
Score0.846
Seed1
Au0.368
Energy-20.0
Binding len22
Me-4.957
Phylopstem-0.49126323588235293
Phylopflank-0.5002320418749999
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure