Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTATAGCTCGCTATGCTGCCCGGCTGGCTGCAGA
((((((((((((((((((((.&))))))))).)))..............)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_183361
GeneSymbolDTNB
Binding site1311,1347
Score0.846
Seed1
Au0.397
Energy-22.9
Binding len36
Me-3.938
Phylopstem1.100990727428572
Phylopflank0.573349981375
Longest consecutive pairings9
Position of longest consecutive pairings27
Pairings in 3prime end7
PositionCDS
2D Structure