Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGCACGGAGTGGTCGGACCGCAGCGTGCT
..((((((((((((.......&.))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_183373
GeneSymbolPXDC1
Binding site304,334
Score1.0
Seed1
Au0.309
Energy-21.4
Binding len15
Me-5.925
Phylopstem0.7000780692307693
Phylopflank2.1041883437500006
Longest consecutive pairings9
Position of longest consecutive pairings5
Pairings in 3prime end1
PositionCDS
2D Structure