Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGATCTCAGTGTGTGGGCAACCTGTATACTCCAGCCGCGTTGTAGGTGGCCAGGA
.((((((.((((((((......&.))))))))....)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_183375
GeneSymbolPRSS48
Binding site55,110
Score0.846
Seed1
Au0.353
Energy-18.8
Binding len20
Me-6.107
Phylopstem4.031477375
Phylopflank2.6376289675
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end2
PositionCDS
2D Structure