Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCCGCAGATGGCATCCGGCTGCGGG
((((((((((((((((.....&)))))))))...........))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_183394
GeneSymbolCADPS
Binding site81,109
Score0.846
Seed1
Au0.338
Energy-22.7
Binding len28
Me-3.938
Phylopstem4.90075074074074
Phylopflank3.88063235
Longest consecutive pairings9
Position of longest consecutive pairings19
Pairings in 3prime end3
Position5UTR
2D Structure