Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGAAAACAGCTGCAGATGAAGATGGCAAGCACCCGCTGCAAG
((((((((((((((((.(((.&)))....)))))))))....................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_183395
GeneSymbolNLRP3
Binding site746,790
Score0.923
Seed1
Au0.412
Energy-21.2
Binding len44
Me-3.938
Phylopstem3.239963722222223
Phylopflank2.7815652875000003
Longest consecutive pairings9
Position of longest consecutive pairings28
Pairings in 3prime end6
Position5UTR
2D Structure