Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGTTGTCACGCGTCCTGTTTGCCCTGAGCCGCCTGGCTGTAGA
((((((((((((((....(((&.)))...))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_183397
GeneSymbolPXMP4
Binding site289,335
Score0.923
Seed1
Au0.368
Energy-22.0
Binding len24
Me-4.906
Phylopstem-0.41006555000000006
Phylopflank-0.07646560124999997
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure