Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGGCGCTACAGGCCCTGTGCCAGGA
.(((((((((...(((((....&.))))).....))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_183404
GeneSymbolRBL1
Binding site123,149
Score0.923
Seed1
Au0.235
Energy-20.8
Binding len21
Me-11.254
Phylopstem4.430703777777778
Phylopflank4.8160444725
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure