Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCTTCAACCTGCTCAAGCTGCC
..(((((((((((((..((((&))))....))))).))...)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_183415
GeneSymbolUBE3B
Binding site3360,3386
Score0.846
Seed1
Au0.382
Energy-21.4
Binding len26
Me-5.19
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure