Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAAACAGCTGCAGTTCTTGTGGG
((((((((((((((((..(((&)))..)))))))))))...))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_183415
GeneSymbolUBE3B
Binding site1401,1426
Score1.0
Seed1
Au0.485
Energy-20.8
Binding len25
Me-3.938
Phylopstem-0.26756210526315793
Phylopflank-0.060299112500000016
Longest consecutive pairings11
Position of longest consecutive pairings9
Pairings in 3prime end6
PositionCDS
2D Structure