Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTTGCATACCAGCTGTAAA
(((((((((.(..(((((((.&)))))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_183421
GeneSymbolFBXO25
Binding site8608,8628
Score0.923
Seed1
Au0.618
Energy-22.7
Binding len20
Me-9.816
Phylopstem-0.053283222222222225
Phylopflank-0.05247312499999999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure