Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTACCCAGGTTCCACCTTCAGTTATTCAGCAGGGTGCTCCTCCATCTTCGCAAGTGG
(((((((.((((((((((((((&)))))))))).....................)))).)))..............)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_183422
GeneSymbolTSC22D1
Binding site2491,2549
Score0.808
Seed1
Au0.515
Energy-22.0
Binding len58
Me-6.251
Phylopstem-0.27670236571428564
Phylopflank-0.10378959675000002
Longest consecutive pairings10
Position of longest consecutive pairings48
Pairings in 3prime end8
PositionCDS
2D Structure