Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GTGACTTGGACAGGTTGCTTCACTCCTGGACGGATGTAGGGGTTTG
((((((((((((((((((((.&)))....))).)))))))....................))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_183422
GeneSymbolTSC22D1
Binding site4806,4852
Score0.846
Seed1
Au0.515
Energy-21.0
Binding len46
Me-3.938
Phylopstem-0.5648108066666666
Phylopflank-0.333917374375
Longest consecutive pairings7
Position of longest consecutive pairings28
Pairings in 3prime end7
Position3UTR
2D Structure