Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCTCAGCCGCAGCACCCGCGGGCACCACTTTCGTGCAGT
(((((((((((((((..(((.&)))..))))))))))....................))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_183425
GeneSymbolRBM38
Binding site772,813
Score0.821
Seed1
Au0.309
Energy-25.2
Binding len41
Me-4.171
Phylopstem-0.39471640657142826
Phylopflank-0.14791489637500002
Longest consecutive pairings10
Position of longest consecutive pairings26
Pairings in 3prime end5
Position3UTR
2D Structure