Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAAGTGT
(((((((((((((((((((...&))))...................)))))))))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_184231
GeneSymbolNCKIPSD
Binding site2379,2419
Score0.846
Seed1
Au0.441
Energy-26.2
Binding len40
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings5
Pairings in 3prime end5
Position3UTR
2D Structure